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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015837516.1_cds_XP_016506647.1_19852
CDS Infomation

[gene=LOC107824411] [db_xref=GeneID:107824411] [protein=branched-chain-amino-acid aminotransferase 3, chloroplastic-like] [protein_id=XP_016506647.1] [location=complement(join(18364..18481,19093..19205,24689..24784,25005..25121,25818..25916,27647..27778,27856..28032,28184..28358,30954..31039,31372..31515))] [gbkey=CDS]
Sequence

ATGGAGAGCGGCGGCGCATTTGCAGGGCTTCATCGGCAACCCAGTTGTAATCACCTTCTC
GGCCCATCACGAACCGCTATTAAGCTTCTTCCTCCTGCTAATTTCTTCACCGACAAACGC
CGTTTTGCTCCTCTCCCTTCAAAGCTTCAGAAGCAGTCACATTTTGCTTCTTACAGTAGT
AATAGCTCCCAAAACAATGGGAGTGCTCTTCAGGTGGCCTCTCCTGCAAGTACAACACCT
GAATTAGCCGACATCGATTGGGATAACCTTGGCTTTAGCATTACGCCTACTGATTATATG
TATATCATGAAATGTTCTCGAGATGAGAACTTTTCTAAGGGTGAGCTACAGCGTTTTGGG
AACATCGAGTTGAGCCCATCTGCTGGGATATTAAATTATGGACAGGGACTGTTTGAAGGT
TTAAAAGCCTATAAAAGACATGATGGTAATATATTGCTATTTCGACCCGAGGAAAATGCT
CTGCGCATGAAGATGGGAGCAGAACGTATATGCATGCCTTCACCATCTGTTGAACAGTTT
GTGGAAGCTGTAAAAGCCACTGTTTTAGCAAATGAAAGATGGATTCCTCCTCCTGGTAAA
GGTTCATTATACATAAGACCGTTGCTTATGGGGAGTGGAGCTGTTCTTGGTGTTGCTCCA
GCTCCTGAGTACACATTTCTGATTTATGTATCACCTGTGGGAAACTATTTTAAGGAAGGT
ATGGCACCAATAAATTTGGTAATCGAGACAGAAATGCACCGTGCAACTCCTGGCGGAACT
GGAGGTGTCAAGACTATAGGAAATTATGCAGCAGTTCTGAAGGCACAGAGTGCTGCTAAA
GCTAAAGGCTACTCTGATGTTCTGTACCTTGATAGTGTGAACAAAAGATACCTAGAGGAG
GTTTCCTCTTGTAATGTTTTCATTGTGAAGGGTAATCTGATAACAACTCCTGCAATTAAA
GGAACCATTCTTCCTGGTATTACACGAAAGAGCATAATTGATGTAGCTGTAAGCCAAGGA
TTCCAGGTTGAAGAACGGCATGTGTGTGTGGACGAATTGCTTGGTGCTGATGAAGTGTTC
TGCACAGGAACTGCAGTGGTTGTATCTCCTGTGGGCAGCATTACTCACATGGGCAAAAGG
GTAACATATGGAAGTGATGGGGTTGGTCGTGTATCACAACAGTTATATTCTGCTCTTACT
AGCCTACAAATGGGACTATCAGAGGATAAGATGGGTTGGATTGTCGAGCTGAAGTGA

Peptide Sequence

PEP ID

XP_016506647.1
PEP Infomation

PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic-like [Nicotiana tabacum]
Sequence

MESGGAFAGLHRQPSCNHLLGPSRTAIKLLPPANFFTDKRRFAPLPSKLQKQSHFASYSS
NSSQNNGSALQVASPASTTPELADIDWDNLGFSITPTDYMYIMKCSRDENFSKGELQRFG
NIELSPSAGILNYGQGLFEGLKAYKRHDGNILLFRPEENALRMKMGAERICMPSPSVEQF
VEAVKATVLANERWIPPPGKGSLYIRPLLMGSGAVLGVAPAPEYTFLIYVSPVGNYFKEG
MAPINLVIETEMHRATPGGTGGVKTIGNYAAVLKAQSAAKAKGYSDVLYLDSVNKRYLEE
VSSCNVFIVKGNLITTPAIKGTILPGITRKSIIDVAVSQGFQVEERHVCVDELLGADEVF
CTGTAVVVSPVGSITHMGKRVTYGSDGVGRVSQQLYSALTSLQMGLSEDKMGWIVELK

Transcript Sequence

Gene sequence data has not been registered.